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SLURM at ABiMS

The Partitions and resource limits#

To request access to partitions on demand such as the bigmem node or the gpu nodes, please submit your request on the community support platform: support.abims@sb-roscoff.fr specifying your login and project name.

⚠️ The values below can change. To check the current situation:

scontrol show partition
sacctmgr list qos format=Name,Priority,MaxTRESPU%20
Partitions Time out Max resources / user Purpose
fast <= 24 hours cpu=300, mem=1500GB Default - Regular jobs
long <= 30 days cpu=300, mem=1500GB Long jobs
bigmem <= 60 days mem=2500GB On demand - For jobs requiring a lot of RAM
clc <= 30 days cpu=300, mem=1500GB On demand - Access CLC Assembly Cell
gpu <= 10 days cpu=300, mem=1500GB On demand - Access GPU cards

The default values#

Param Default value
--mem 2GB
--cpus 1

ABiMS Cluster Computing nodes#

⚠️ The values below can change. To check the current situation:

sinfo -Ne --format "%.15N %.4c %.7z %.7m" -S c,m,N | uniq

(Last update: 20/11/2023)

CPU nodes#

Nbr CPU (Hyper-Thread) RAM (GB )
10 48 250
7 96 250
4 256 250
16 104 1000
1 80 1020
1 128 2060

(Last update: 04/05/2022)

GPU nodes#

Nbr GPU CPU RAM (GB ) Type Disk /tmp
1 2 40 128 NVIDIA k80 32 GB

GPU Instance Profiles#

⚠️ The values below can change. To check the current situation:

sinfo -Ne -p gpu --format "%.15N %.4c %.7m %G"
Profile Name GPU Memory Number of Instances Available
k80 24GB 2